Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0176469

https://doi.org/10.1371/journal.pone.0176469

MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads

Cited by: 59
Author(s): Thomas Nordahl Petersen, Oksana Lukjancenko, Martin Christen Frølund Thomsen, Maria Maddalena Sperotto, Ole Lund, Frank Møller Aarestrup, Thomas Sicheritz-Pontén
Published: over 7 years ago

Software Mentions 3

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: kraken
OCR/HTR engine for all the languages
Papers that mentioned: 24