Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0139868

https://doi.org/10.1371/journal.pone.0139868

NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data

Cited by: 31
Author(s): Mohan A. V. S. K. Katta, Aamir W. Khan, Dadakhalandar Doddamani, Mahendar Thudi, Rajeev K. Varshney
Published: about 9 years ago

Software Mentions 5

pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: bpipe
Minimal & Simple Pipeline for Python
Papers that mentioned: 11
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: linux

Papers that mentioned: 450
pypi: Sickle
A lightweight OAI client library for Python
Papers that mentioned: 740