Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0126545

https://doi.org/10.1371/journal.pone.0126545

Probe Region Expression Estimation for RNA-Seq Data for Improved Microarray Comparability

Cited by: 15
Author(s): Karolis Uziela, Antti Honkela
Published: over 9 years ago

Software Mentions 7

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: prebs
Probe region expression estimation for RNA-seq data for improved microarray comparability
Papers that mentioned: 1
bioconductor: RPA
RPA: Robust Probabilistic Averaging for probe-level analysis
Papers that mentioned: 19
cran: psych
Procedures for Psychological, Psychometric, and Personality Research
Papers that mentioned: 1,085
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017