Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0105097

https://doi.org/10.1371/journal.pone.0105097

Transcriptome of American Oysters, Crassostrea virginica, in Response to Bacterial Challenge: Insights into Potential Mechanisms of Disease Resistance

Cited by: 64
Author(s): Ian C. McDowell, Chamilani Nikapitiya, Derek Aguiar, Christopher E. Lane, Sorin Istrail, Marta Gómez-Chiarri
Published: over 10 years ago

Software Mentions 5

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
cran: fastcluster
Fast Hierarchical Clustering Routines for R and 'Python'
Papers that mentioned: 36
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: fastcluster
Fast hierarchical clustering routines for R and Python.
Papers that mentioned: 36