Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0102398

https://doi.org/10.1371/journal.pone.0102398

JAGuaR: Junction Alignments to Genome for RNA-Seq Reads

Cited by: 51
Author(s): Yaron S.N. Butterfield, Maayan Kreitzman, Nina Thiessen, Richard Corbett, Yisu Li, Johnson Pang, P. Yussanne, Steven J.M. Jones, İnanç Birol
Published: over 10 years ago

Software Mentions 4

cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: GenomeBrowser
Python classes for making Genomebrowser snapshots.
Papers that mentioned: 19
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017