Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0012657

https://doi.org/10.1371/journal.pone.0012657

A Comprehensive and Universal Method for Assessing the Performance of Differential Gene Expression Analyses

Cited by: 13
Author(s): Mikhail G. Dozmorov, Joel M. Guthridge, Robert E. Hurst, Igor Dozmorov
Published: about 14 years ago

Software Mentions 6

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: diffGeneAnalysis
Performs differential gene expression Analysis
Papers that mentioned: 3
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: vsn
Variance stabilization and calibration for microarray data
Papers that mentioned: 91
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566