Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1009820

https://doi.org/10.1371/journal.pgen.1009820

Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into nature

Cited by: 7
Author(s): Mark Achtman, Frederik Van den Broeck, Kerry K. Cooper, Philippe Lemey, Craig T. Parker, Zhemin Zhou
Published: about 3 years ago

Software Mentions 5

cran: BETS
Brazilian Economic Time Series
Papers that mentioned: 8
pypi: HierCC
Hierarchical Clustering of cgMLST profiles
Papers that mentioned: 15
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
pypi: PEPPAN
Phylogeny Enhanded Prediction of PAN-genome https://doi.org/10.1101/2020.01.03.894154
Papers that mentioned: 2
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.
Papers that mentioned: 82