Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1008749

https://doi.org/10.1371/journal.pgen.1008749

Genome-wide DNA methylation and gene expression patterns reflect genetic ancestry and environmental differences across the Indonesian archipelago

Cited by: 29
Author(s): Heini M. Natri, Katalina Bobowik, Pradiptajati Kusuma, Chelzie Crenna Darusallam, Guy S. Jacobs, Georgi Hudjashov, J. Stephen Lansing, Herawati Sudoyo, Nicholas E. Banovich, Murray P. Cox, Irene Gallego Romero
Published: over 4 years ago

Software Mentions 6

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: MethylMix
MethylMix: Identifying methylation driven cancer genes
Papers that mentioned: 53
bioconductor: missMethyl
Analysing Illumina HumanMethylation BeadChip Data
Papers that mentioned: 54
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759