Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1007467

https://doi.org/10.1371/journal.pgen.1007467

Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae

Cited by: 73
Author(s): David J. Winter, Austen R. D. Ganley, Carolyn A. Young, Ivan Liachko, Christopher L. Schardl, Pierre‐Yves Dupont, Daniel Berry, Arvina Ram, Barry Scott, Murray P. Cox
Published: about 6 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: TopDom
An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
Papers that mentioned: 31