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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pgen.1007102

https://doi.org/10.1371/journal.pgen.1007102

Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content

Cited by: 16
Author(s): Daniele Colombo, Lukas Burger, Tuncay Baubec, Dirk Schübeler
Published: over 7 years ago

Software Mentions 10

bioconductor: DNAshapeR
High-throughput prediction of DNA shape features
Papers that mentioned: 10
Very Likely Science (73)
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: MethylSeekR
Segmentation of Bis-seq data
Papers that mentioned: 33
Very Likely Science (90)
bioconductor: QuasR
Quantify and Annotate Short Reads in R
Papers that mentioned: 30
Very Likely Science (90)
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
Very Likely Science (90)
cran: maptools
Tools for Handling Spatial Objects
Papers that mentioned: 269
Very Likely Science (75)
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
Very Likely Science (100)
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
Very Likely Science (90)
pypi: maptools
Manipulate maps
Papers that mentioned: 269
Very Likely Science (100)