Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pgen.1006995
https://doi.org/10.1371/journal.pgen.1006995
Environmental perturbations lead to extensive directional shifts in RNA processing
Cited by: 24
Author(s): Allison L. Richards, Donovan Watza, Anthony Findley, Adnan Alazizi, Xiaoquan Wen, Athma A. Pai, Roger Piqué-Regi, Francesca Luca
Published: about 7 years ago
Software Mentions 8
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear ModelsPapers that mentioned: 1,607
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matricesPapers that mentioned: 1,283
pypi: compare
Alternative syntax for comparing/asserting expressions in Python. Supports pluggable matchers for custom comparisons.Papers that mentioned: 23
pypi: of
The Optimal Framework is the fastest path to building any modern multi-user systemPapers that mentioned: 1,025