Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1006449

https://doi.org/10.1371/journal.pgen.1006449

Genomic Characterization of Metformin Hepatic Response

Cited by: 38
Author(s): Marcelo R. Luizon, Walter L. Eckalbar, Yao Wang, Stacy L. Jones, Robin P. Smith, Laurance Megan, Lawrence Lin, Paul J. Gallins, Amy S. Etheridge, Fred A. Wright, Yifeng Zhou, Cliona Molony, Federico Innocenti, Sook Wah Yee, Kathleen M. Giacomini, Nadav Ahituv
Published: almost 8 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203