Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1004339

https://doi.org/10.1371/journal.pgen.1004339

Biased, Non-equivalent Gene-Proximal and -Distal Binding Motifs of Orphan Nuclear Receptor TR4 in Primary Human Erythroid Cells

Cited by: 6
Author(s): Lihong Shi, Michael C. Sierant, Katherine Gurdziel, Fan Zhu, Shuaiying Cui, Katarzyna Ewa Kolodziej, John Strouboulis, Yuanfang Guan, Osamu Takahashi, Kim Chew Lim, James Douglas Engel
Published: over 10 years ago

Software Mentions 3

cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017