Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1006940

https://doi.org/10.1371/journal.pcbi.1006940

CNEr: A toolkit for exploring extreme noncoding conservation

Cited by: 15
Author(s): Ge Tan, Dimitris Polychronopoulos, Boris Lenhard
Published: over 5 years ago

Software Mentions 6

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: CNEr
CNE Detection and Visualization
Papers that mentioned: 3
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: LOLA
Locus overlap analysis for enrichment of genomic ranges
Papers that mentioned: 56
bioconductor: regioneR
Association analysis of genomic regions based on permutation tests
Papers that mentioned: 30
cran: latticeExtra
Extra Graphical Utilities Based on Lattice
Papers that mentioned: 60