Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1005727

https://doi.org/10.1371/journal.pcbi.1005727

kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity

Cited by: 40
Author(s): Kevin Murray, Christfried Webers, Cheng Soon Ong, Justin O. Borevitz, Norman Warthmann
Published: about 7 years ago

Software Mentions 8

bioconductor: SNPRelate
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
Papers that mentioned: 204
pypi: Archive
Simple library that provides a common interface for extracting zip and tar archives.
Papers that mentioned: 363
pypi: khmer
khmer k-mer counting library
Papers that mentioned: 110
pypi: mash
Python lib for converting dict to objects recursive
Papers that mentioned: 28
pypi: scikit-bio
Data structures, algorithms and educational resources for bioinformatics.
Papers that mentioned: 41
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213
pypi: sra-py
Python wrapper for some-random-api.ml
Papers that mentioned: 1