Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1003457

https://doi.org/10.1371/journal.pcbi.1003457

Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data

Cited by: 207
Author(s): Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson
Published: almost 11 years ago

Software Mentions 5

cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: outbreaker
Explore WHO Disease Outbreak News
Papers that mentioned: 8