Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pbio.3001306

https://doi.org/10.1371/journal.pbio.3001306

Dynamic landscape of protein occupancy across the Escherichia coli chromosome

Cited by: 18
Author(s): Peter L. Freddolino, Haley M. Amemiya, Thomas J. Goss, Saeed Tavazoie
Published: over 3 years ago

Software Mentions 4

pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
pypi: Scaffold
Simple project scaffolding for Python
Papers that mentioned: 1,866
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431