Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pbio.3001276

https://doi.org/10.1371/journal.pbio.3001276

Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae

Cited by: 37
Author(s): Matthieu Haudiquet, Amandine Nucci, Olaya Rendueles, Eduardo P. C. Rocha
Published: over 3 years ago

Software Mentions 9

bioconductor: treeio
Base Classes and Functions for Phylogenetic Tree Input and Output
Papers that mentioned: 32
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: phangorn
Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: snippy
Snippy is a software development and maintenance notes manager.
Papers that mentioned: 77
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
pypi: treeio
A pure python parser for tree data format IO
Papers that mentioned: 32