Data

Tools

Indexes

Applications

Experiments

Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pbio.3000528

https://doi.org/10.1371/journal.pbio.3000528

Single-cell transcriptomics of the naked mole-rat reveals unexpected features of mammalian immunity

Cited by: 74
Author(s): Hugo G. Hilton, Nimrod D. Rubinstein, Peter Janki, Andrea Ireland, Nicholas Bernstein, Nicole L. Fong, Kevin M. Wright, Megan Smith, David Finkle, Baby Martin-McNulty, Margaret Roy, Denise M. Imai, Vladimir Jojic, Rochelle Buffenstein
Published: over 5 years ago

Software Mentions 10

bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
Very Likely Science (100)
bioconductor: SIM
Integrated Analysis on two human genomic datasets
Papers that mentioned: 554
Very Likely Science (100)
cran: castor
Efficient Phylogenetics on Large Trees
Papers that mentioned: 5
Very Likely Science (90)
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
Very Likely Science (85)
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
Very Likely Science (100)
cran: nnet
Feed-Forward Neural Networks and Multinomial Log-Linear Models
Papers that mentioned: 296
Very Likely Science (93)
cran: rsvd
Randomized Singular Value Decomposition
Papers that mentioned: 2
Very Likely Science (100)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
Very Likely Science (90)
pypi: castor
Assemble Git repos into a deployable tree of code.
Papers that mentioned: 5
Very Likely Science (65)