Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.13196.2

https://doi.org/10.12688/f1000research.13196.2

Cited by: 42
Author(s): Yunshun Chen, Bhupinder Pal, Jane E. Visvader, Gordon K. Smyth
Published: over 5 years ago

Software Mentions 8

bioconductor: BiSeq
Processing and analyzing bisulfite sequencing data
Papers that mentioned: 33
bioconductor: bsseq
Analyze, manage and store bisulfite sequencing data
Papers that mentioned: 38
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing results
Papers that mentioned: 154
bioconductor: RnBeads
RnBeads
Papers that mentioned: 145