Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1264/jsme2.ME18109

https://doi.org/10.1264/jsme2.ME18109

Cited by: 33
Author(s): Turgut Yiğit Akyol, Rieko Niwa, Hideki Hirakawa, Hayato Maruyama, Takumi Sato, Takae Suzuki, Ayako Fukunaga, Takashi Sato, Shigenobu Yoshida, Keitaro Tawaraya, Masanori Saitô, Tatsuhiro Ezawa, Shusei Sato
Published: over 5 years ago

Software Mentions 9

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: phyloseq

Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: indicspecies

Relationship Between Species and Groups of Sites
Papers that mentioned: 218

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

cran: RDP

The Ramer-Douglas-Peucker Algorithm
Papers that mentioned: 1,243

cran: RVAideMemoire

Testing and Plotting Procedures for Biostatistics
Papers that mentioned: 191

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555