Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1242/dev.184143

https://doi.org/10.1242/dev.184143

A single cell transcriptome atlas of the developing zebrafish hindbrain

Cited by: 33
Author(s): Monica Tambalo, Richard Mitter, David Wilkinson
Published: almost 5 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GENIE3
GEne Network Inference with Ensemble of trees
Papers that mentioned: 172
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: aggr
Automate feature aggregation
Papers that mentioned: 3