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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s40478-019-0851-y

https://doi.org/10.1186/s40478-019-0851-y

Single-nucleus chromatin accessibility reveals intratumoral epigenetic heterogeneity in IDH1 mutant gliomas

Cited by: 12
Author(s): Ruslan Al‐Ali, Katharina Bauer, Jong‐Whi Park, Ruba Al-Abdulla, Valentina Fermi, Andreas von Deimling, Christel Herold‐Mende, Jan‐Philipp Mallm, Carl Herrmann, Wolfgang Wick, Şevin Turcan
Published: over 5 years ago

Software Mentions 9

bioconductor: chromVAR
Chromatin Variation Across Regions
Papers that mentioned: 46
Very Likely Science (65)
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Very Likely Science (90)
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
Very Likely Science (100)
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
Very Likely Science (90)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
Very Likely Science (100)
cran: survival
Survival Analysis
Papers that mentioned: 1,690
Very Likely Science (100)
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575
Very Likely Science (65)
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690
Very Likely Science (90)