Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-021-01123-9

https://doi.org/10.1186/s40168-021-01123-9

The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum

Cited by: 13
Author(s): Connor R. Tiffany, Jee Yon Lee, Alisdair Rogers, Erin E. Olsan, Pavel Morales, Franziska Faber, Andreas J. Bäumler
Published: over 3 years ago

Software Mentions 5

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: omu
A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection
Papers that mentioned: 5