Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-021-01033-w

https://doi.org/10.1186/s40168-021-01033-w

High throughput sequencing provides exact genomic locations of inducible prophages and accurate phage-to-host ratios in gut microbial strains

Cited by: 19
Author(s): Mirjam Zünd, Hans‐Joachim Ruscheweyh, Christopher M. Field, Natalie Meyer, Miguelangel Cuenca, Daniel Hoces, Wolf‐Dietrich Hardt, Shinichi Sunagawa
Published: over 3 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555