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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s40168-020-00907-9

https://doi.org/10.1186/s40168-020-00907-9

Impact of investigational microbiota therapeutic RBX2660 on the gut microbiome and resistome revealed by a placebo-controlled clinical trial

Cited by: 33
Author(s): Suryang Kwak, Joo-Hee Choi, Tiffany Hink, Kimberly A. Reske, Kenneth Blount, Courtney Jones, Margaret H. Bost, Xiaoqing Sun, Carey-Ann D. Burnham, Erik R. Dubberke, Gautam Dantas
Published: almost 5 years ago

Software Mentions 5

cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
Very Likely Science (100)
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
Very Likely Science (85)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
Very Likely Science (65)
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306
Very Likely Science (100)