Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-019-0629-2

https://doi.org/10.1186/s40168-019-0629-2

The occurrence of potato common scab correlates with the community composition and function of the geocaulosphere soil microbiome

Cited by: 118
Author(s): Wencong Shi, Mingcong Li, Guangshan Wei, Renmao Tian, Cuiping Li, Bing Wang, Runmao Lin, Chunyu Shi, Chi Xiu-li, Bo Zhou, Zheng Gao
Published: almost 6 years ago

Software Mentions 1

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306