Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-017-0392-1

https://doi.org/10.1186/s40168-017-0392-1

Metabolic capability and in situ activity of microorganisms in an oil reservoir

Cited by: 61
Author(s): Yi Fan Liu, Daniela Domingos Galzerani, Serge Maurice Mbadinga, Livia S. Zaramela, Ji Dong Gu, Bo Zhong Mu, Karsten Zengler
Published: almost 7 years ago

Software Mentions 5

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
cran: Nonpareil
Metagenome Coverage Estimation and Projections for 'Nonpareil'
Papers that mentioned: 33
pypi: EMIRGE
EMIRGE reconstructs full length sequences from short sequencing reads
Papers that mentioned: 94
pypi: GroopM
Metagenomic binning suite
Papers that mentioned: 32
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
Papers that mentioned: 144