Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-017-0314-2

https://doi.org/10.1186/s40168-017-0314-2

A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis

Cited by: 61
Author(s): Fiona Whelan, Michael G. Surette
Published: over 7 years ago

Software Mentions 6

bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
pypi: Sickle
A lightweight OAI client library for Python
Papers that mentioned: 740
pypi: Silva
Silva Content Management System
Papers that mentioned: 445
pypi: Swarm
Swarm is a strategy rouge-like space simulator game written with `pygame/python3`.
Papers that mentioned: 151