Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s40168-017-0304-4

https://doi.org/10.1186/s40168-017-0304-4

Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome

Cited by: 145
Author(s): Yunzeng Zhang, Jin Xu, Nadia Riera, Tao Jin, Jinyun Li, Nian Wang
Published: over 7 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
pypi: MicrobeCensus
A command-line tool for estimating average genome size from shotgun sequence data
Papers that mentioned: 25
pypi: Sickle
A lightweight OAI client library for Python
Papers that mentioned: 740