Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13742-016-0137-2

https://doi.org/10.1186/s13742-016-0137-2

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinIONTM sequencing

Cited by: 75
Author(s): Minh Duc Cao, Devika Ganesamoorthy, Alysha G. Elliott, Huihui Zhang, Matthew A. Cooper, Lachlan Coin
Published: over 8 years ago

Software Mentions 2

cran: MultinomialCI
Simultaneous Confidence Intervals for Multinomial Proportions According to the Method by Sison and Glaz
Papers that mentioned: 5
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306