Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13287-020-01823-3

https://doi.org/10.1186/s13287-020-01823-3

Multiomics global landscape of stemness-related gene clusters in adipose-derived mesenchymal stem cells

Cited by: 8
Author(s): Guan-Ming Lu, Yong-Xian Rong, Zheng Liang, Dong-Lin Hunag, Yuju Ma, Zhizhai Luo, Fengyao Wu, Xinheng Liu, Yu Liu, Steven Mo, Zhongquan Qi, Hong-Mian Li
Published: over 4 years ago

Software Mentions 7

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017