Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13148-020-00965-8

https://doi.org/10.1186/s13148-020-00965-8

5-Hydroxymethylation highlights the heterogeneity in keratinization and cell junctions in head and neck cancers

Cited by: 8
Author(s): Siyu Liu, Marcell Costa de Medeiros, Evan Fernandez, Katie R. Zarins, Raymond G. Cavalcante, Tingting Qin, Gregory T. Wolf, María E. Figueroa, Nisha J. D’Silva, Laura S. Rozek, Maureen A. Sartor
Published: about 4 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: PePr
Peak-calling and Prioritization pipeline for replicated ChIP-Seq data
Papers that mentioned: 18