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Papers: 10.1186/s13104-019-4473-z

https://doi.org/10.1186/s13104-019-4473-z

RepViz: a replicate-driven R tool for visualizing genomic regions

Cited by: 0
Author(s): Thomas Faux, Kalle T. Rytkönen, Asta Laiho, Laura L. Elo
Published: about 6 years ago

Software Mentions 8

bioconductor: ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Papers that mentioned: 145
Very Likely Science (76)
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
Very Likely Science (100)
bioconductor: GenVisR
Genomic Visualizations in R
Papers that mentioned: 54
Very Likely Science (100)
bioconductor: ggbio
Visualization tools for genomic data
Papers that mentioned: 53
Very Likely Science (100)
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
Very Likely Science (100)
bioconductor: RepViz
Replicate oriented Visualization of a genomic region
Papers that mentioned: 1
Very Likely Science (100)
bioconductor: Sushi
Papers that mentioned: 18
Unlikely Science (0)
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
Very Likely Science (100)