Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13073-021-00960-5
https://doi.org/10.1186/s13073-021-00960-5
Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study
Cited by: 17
Author(s): Aline Cuénod, Daniel Wüthrich, Helena M. B. Seth-Smith, Chantal Ott, Christian Gehringer, Frédéric Foucault, Roxanne Mouchet, Ali Kassim, Gunturu Revathi, Deborah R Vogt, Stefanie von Felten, Stefano Bassetti, Sarah Tschudin‐Sutter, Timm Hettich, Götz Schlotterbeck, Christina Homberger, Carlo Casanova, Jacob Moran-Gilad, Orli Sagi, Belén Rodríguez‐Sánchez, Franco B. Müller, Martina Aerni, Valéria Gaia, Helke van Dessel, Greetje A. Kampinga, Cláudia Müller, Claudia Daubenberger, Valentin Pflüger, Adrian Egli
Published: over 3 years ago
Software Mentions 2
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306