Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13073-021-00956-1

https://doi.org/10.1186/s13073-021-00956-1

De novo transcriptomic subtyping of colorectal cancer liver metastases in the context of tumor heterogeneity

Cited by: 8
Author(s): Seyed H. Moosavi, Peter W. Eide, Ina A. Eilertsen, Tuva H. Brunsell, Kaja Christine Graue Berg, Bård I. Røsok, Kristoffer Watten Brudvik, Bjørn Atle Bjørnbeth, Marianne Grønlie Guren, Arild Nesbakken, Ragnhild A. Lothe, Anita Sveen
Published: about 3 years ago

Software Mentions 5

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: caret
Classification and Regression Training
Papers that mentioned: 630
pypi: caret
A Python Interface to Asterisk
Papers that mentioned: 630
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893