Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13073-021-00921-y

https://doi.org/10.1186/s13073-021-00921-y

Dietary fiber intake, the gut microbiome, and chronic systemic inflammation in a cohort of adult men

Cited by: 47
Author(s): Wenjie Ma, Long H. Nguyen, Mingyang Song, Dong D. Wang, Eric A. Franzosa, Yin Cao, Amit D. Joshi, David A. Drew, Raaj S. Mehta, Kerry L. Ivey, Lisa L. Strate, Edward Giovannucci, Jacques Izard, Wendy S. Garrett, Eric B. Rimm, Curtis Huttenhower, Andrew T. Chan
Published: over 3 years ago

Software Mentions 2

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306