Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13073-020-00751-4

https://doi.org/10.1186/s13073-020-00751-4

Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples

Cited by: 98
Author(s): Mao Xiao, Xiaoqing Liu, Jingkai Ji, Min Li, Jiandong Li, Lin Yang, Wanying Sun, Peng Ren, Guifang Yang, Jincun Zhao, Tianzhu Liang, Huahui Ren, Cheng Tian, Zhong Huang, Wenchen Song, Yanqun Wang, Ziqing Deng, Yongqiang Zhao, Zhihua Ou, Daxi Wang, Jielun Cai, Xinyi Cheng, Taiqing Feng, Honglong Wu, Yanping Gong, Huanming Yang, Jian Wang, Xun Xu, Shida Zhu, Fang Chen, Yanyan Zhang, Weijun Chen, Yimin Li, Junhua Li
Published: about 4 years ago

Software Mentions 5

cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
pypi: pysamstats
A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file.
Papers that mentioned: 17
pypi: snippy
Snippy is a software development and maintenance notes manager.
Papers that mentioned: 77