Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13073-018-0534-5

https://doi.org/10.1186/s13073-018-0534-5

Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

Cited by: 108
Author(s): Wei-Hung Pan, Felix Sommer, Maren Falk-Paulsen, Thomas Ulas, Lena Best, Antonella Fazio, Priyadarshini Kachroo, Anne Luzius, Marlene Jentzsch, Ateequr Rehman, Fabian Müller, Thomas Lengauer, Joern Walter, Sven Künzel, John F. Baines, Stefan Schreiber, André Franke, Joachim L. Schultze, Fredrik Bäckhed, Philip Rosenstiel
Published: over 6 years ago

Software Mentions 3

bioconductor: bsseq
Analyze, manage and store bisulfite sequencing data
Papers that mentioned: 38
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017