Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13072-019-0297-2

https://doi.org/10.1186/s13072-019-0297-2

MEK inhibition remodels the active chromatin landscape and induces SOX10 genomic recruitment in BRAF(V600E) mutant melanoma cells

Cited by: 9
Author(s): Temesgen Fufa, Laura L. Baxter, Julia C. Wedel, Derek Gildea, Stacie K. Loftus, William J. Pavan
Published: over 5 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
cran: ROSE
Random Over-Sampling Examples
Papers that mentioned: 131
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366