Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13062-015-0071-8

https://doi.org/10.1186/s13062-015-0071-8

Experiences with workflows for automating data-intensive bioinformatics

Cited by: 51
Author(s): Ola Spjuth, Erik Bongcam‐Rudloff, Guillermo Carrasco Hernández, Lukas Forer, Mario Giovacchini, Roman Valls Guimerà, Aleksi Kallio, Eija Korpelainen, Maciej M. Kańduła, Milko Krachunov, David P. Kreil, Ognyan Kulev, Paweł P. Łabaj, Samuel Lampa, Luca Pireddu, Sebastian Schönherr, Alexey Siretskiy, Dimitar Vassilev
Published: over 9 years ago

Software Mentions 4

bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
pypi: cufflinks
Productivity Tools for Plotly + Pandas
Papers that mentioned: 415
pypi: genome

Papers that mentioned: 36
pypi: shell
A better way to run shell commands in Python.
Papers that mentioned: 207