Data

Tools

Indexes

Applications

Experiments

Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13059-021-02483-z

https://doi.org/10.1186/s13059-021-02483-z

Trycycler: consensus long-read assemblies for bacterial genomes

Cited by: 128
Author(s): Ryan R. Wick, Louise M. Judd, Louise Cerdeira, Jane Hawkey, Guillaume Méric, Ben Vezina, Kelly L. Wyres, Kathryn E. Holt
Published: almost 4 years ago

Software Mentions 4

cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
Very Likely Science (85)
pypi: edlib
Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance.
Papers that mentioned: 11
Very Likely Science (90)
pypi: py
library with cross-python path, ini-parsing, io, code, log facilities
Papers that mentioned: 403
Very Likely Science (65)
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.
Papers that mentioned: 82
Likely Science (40)