Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02417-9

https://doi.org/10.1186/s13059-021-02417-9

Elevated retrotransposon activity and genomic instability in primed pluripotent stem cells

Cited by: 10
Author(s): Haifeng Fu, Weiyu Zhang, Niannian Li, Jiao Yang, Xiaoying Ye, Chenglei Tian, Xinyi Lu, Lin Liu
Published: over 3 years ago

Software Mentions 5

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125
pypi: CNVkit
Copy number variation toolkit for high-throughput sequencing.
Papers that mentioned: 161
pypi: picard
The next generation MusicBrainz tagger
Papers that mentioned: 243