Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-021-02413-z
https://doi.org/10.1186/s13059-021-02413-z
Integration of metabolomics, genomics, and immune phenotypes reveals the causal roles of metabolites in disease
Cited by: 24
Author(s): Xiaojing Chu, Martin Jaeger, Joep Beumer, Olivier B. Bakker, Raúl Aguirre-Gamboa, Marije Oosting, Sanne P. Smeekens, Simone J.C.F.M. Moorlag, Vera P. Mourits, Valerie A C M Koeken, Charlotte de Bree, Trees Jansen, Ian T. Mathews, Khoi Dao, Mahan Najhawan, Jeramie D. Watrous, Irma Joosten, Sonia Sharma, Hans J. P. M. Koenen, Sebo Withoff, Iris Jonkers, Romana T. Netea‐Maier, Ramnik J. Xavier, Lude Franke, Cheng‐Jian Xu, Leo A. B. Joosten, Serena Sanna, Mohit Jain, Vinod Kumar, Hans Clevers, Cisca Wijmenga, Mihai G. Netea, Yang Li
Published: over 3 years ago
Software Mentions 2
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306