Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02411-1

https://doi.org/10.1186/s13059-021-02411-1

Direct long-read RNA sequencing identifies a subset of questionable exitrons likely arising from reverse transcription artifacts

Cited by: 15
Author(s): Laura Schulz, Manuel Torres-Diz, Mariela Cortés-López, Katharina E. Hayer, Mukta Asnani, Sarah K. Tasian, Yoseph Barash, Elena Sotillo, Kathi Zarnack, Julian König, Andrei Thomas-Tikhonenko
Published: over 3 years ago

Software Mentions 4

bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: megadepth
megadepth: BigWig and BAM related utilities
Papers that mentioned: 1
bioconductor: recount3
Explore and download data from the recount3 project
Papers that mentioned: 2
pypi: guppy
Guppy-PE -- A Python Programming Environment
Papers that mentioned: 53