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Papers: 10.1186/s13059-021-02368-1

https://doi.org/10.1186/s13059-021-02368-1

treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses

Cited by: 4
Author(s): Ronald Huang, Charlotte Soneson, Pierre‐Luc Germain, Thomas Schmidt, Christian von Mering, Mark D. Robinson
Published: about 4 years ago

Software Mentions 10

bioconductor: diffcyt
Differential discovery in high-dimensional cytometry via high-resolution clustering
Papers that mentioned: 18
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: FlowSOM
Using self-organizing maps for visualization and interpretation of cytometry data
Papers that mentioned: 177
Very Likely Science (75)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: miLineage
Association Tests for Microbial Lineages on a Taxonomic Tree
Papers that mentioned: 1
Very Likely Science (83)
cran: rare
Linear Model with Tree-Based Lasso Regularization for Rare Features
Papers that mentioned: 1
Very Likely Science (100)
cran: StructFDR
False Discovery Control Procedure Integrating the Prior Structure Information
Papers that mentioned: 1
Very Likely Science (83)
pypi: conda
OS-agnostic, system-level binary package manager.
Papers that mentioned: 92
Very Likely Science (100)
pypi: lasso
A simple lasso package
Papers that mentioned: 42
Very Likely Science (65)
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
Very Likely Science (90)