Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02368-1

https://doi.org/10.1186/s13059-021-02368-1

treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses

Cited by: 4
Author(s): Ronald Huang, Charlotte Soneson, Pierre‐Luc Germain, Thomas Schmidt, Christian von Mering, Mark D. Robinson
Published: over 3 years ago

Software Mentions 10

bioconductor: diffcyt
Differential discovery in high-dimensional cytometry via high-resolution clustering
Papers that mentioned: 18
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: FlowSOM
Using self-organizing maps for visualization and interpretation of cytometry data
Papers that mentioned: 177
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: miLineage
Association Tests for Microbial Lineages on a Taxonomic Tree
Papers that mentioned: 1
cran: rare
Linear Model with Tree-Based Lasso Regularization for Rare Features
Papers that mentioned: 1
cran: StructFDR
False Discovery Control Procedure Integrating the Prior Structure Information
Papers that mentioned: 1
pypi: conda
OS-agnostic, system-level binary package manager.
Papers that mentioned: 92
pypi: lasso
A simple lasso package
Papers that mentioned: 42
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105