Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-021-02329-8

https://doi.org/10.1186/s13059-021-02329-8

scMET: Bayesian modeling of DNA methylation heterogeneity at single-cell resolution

Cited by: 13
Author(s): Chantriolnt-Andreas Kapourani, Ricard Argelaguet, Guido Sanguinetti, Catalina A. Vallejos
Published: over 3 years ago

Software Mentions 11

bioconductor: BASiCS
Bayesian Analysis of Single-Cell Sequencing data
Papers that mentioned: 21
bioconductor: DMRcate
Methylation array and sequencing spatial analysis methods
Papers that mentioned: 132
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: Melissa
Bayesian clustering and imputationa of single cell methylomes
Papers that mentioned: 4
bioconductor: MOFA2
Multi-Omics Factor Analysis v2
Papers that mentioned: 2
bioconductor: RnBeads
RnBeads
Papers that mentioned: 145
cran: BB
Solving and Optimizing Large-Scale Nonlinear Systems
Papers that mentioned: 22
cran: umap
Uniform Manifold Approximation and Projection
Papers that mentioned: 24
cran: VGAM
Vector Generalized Linear and Additive Models
Papers that mentioned: 89
pypi: umap
UNIST synthesis MAP solution
Papers that mentioned: 24