Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02240-8

https://doi.org/10.1186/s13059-020-02240-8

Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer

Cited by: 51
Author(s): Miho Oka, Lai Xu, Toshihiro Suzuki, Toshiaki Yoshikawa, Hiromi Sanada, Hayato Uemura, Akiyasu C. Yoshizawa, Yutaka Suzuki, Tetsuya Nakatsura, Yasushi Ishihama, Ayako Suzuki, Masahide Seki
Published: almost 4 years ago

Software Mentions 4

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: 0
0
Papers that mentioned: 1,265
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893