Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02190-1

https://doi.org/10.1186/s13059-020-02190-1

DNA polymerase epsilon is required for heterochromatin maintenance in Arabidopsis

Cited by: 12
Author(s): Pierre Bourguet, Leticia López-González, Ángeles Gómez-Zambrano, Thierry Pélissier, Amy Hesketh, Magdalena E. Potok, Marie-Noëlle Pouch-Pélissier, Magali Perez, Olivier Da Ines, David Latrasse, Charles I. White, Steven E. Jacobsen, Moussa Benhamed, Olivier Mathieu
Published: about 4 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: NSM3
Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
Papers that mentioned: 8
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017