Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02128-7

https://doi.org/10.1186/s13059-020-02128-7

Tuning parameters of dimensionality reduction methods for single-cell RNA-seq analysis

Cited by: 15
Author(s): Félix Raimundo, Céline Vallot, Jean-Philippe Vert
Published: about 4 years ago

Software Mentions 6

bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
cran: DCA
Dynamic Correlation Analysis for High Dimensional Data
Papers that mentioned: 128
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: DCA
Count autoencoder for scRNA-seq denoising
Papers that mentioned: 128
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431